If mysql-bin.* files are taking up all the space, you can use the following steps to clear the space:
log in to mysql as root
then run this command to clear all log up until now:
PURGE BINARY LOGS BEFORE NOW();
Or run this if you want to clear it up to certain date:
PURGE BINARY LOGS BEFORE '2010-08-02 22:46:26';
To change the number of date the log retain, say 14 days:
Edit /etc/my.cnf
Add this line: expire_logs_days=14
Restart mysql
Verify it by running this sql:
select @@expire_logs_days;